Hadar Benyamini's Publications:

1. Levin A, Benyamini H, Hayouka Z, Friedler A, Loyter A. (2011) Peptides that bind the HIV-1 integrase and modulate its enzymatic activity: Kinetic studies and mode of action. FEBS J., 278, 316-330 [PubMed]

2. Benyamini, H and Friedler A. (2011) The ASPP interaction network: electrostatic differentiation between pro- and anti-apoptotic proteins. J. Mol. Recognit. 24: 266-74 [PubMed]

3. Hayouka Z, Hurevich M, Levin A, Benyamini H, Iosub A, Maes M, Shalev DE, Loyter A, Gilon C, Friedler A. (2010) Cyclic peptide inhibitors of HIV-1 integrase derived from the LEDGH/p75 protein. Bioorg Med Chem, 18: 8388-8395 [PubMed]

4. Benyamini, H and Friedler A. (2010) Using peptides to study protein protein interactions. Future Med. Chem. 2: 989-1003 [PubMed]

5. Benyamini H, Leonov H, Rotem S, Katz C, Arkin IT, Friedler A. (2009). A model for the interaction between NF-Kappa-B and ASPP2 suggests an I-Kappa-B like mechanism. Proteins: Structure, Function and Bioinformatics. 77(3):602-11. [PubMed]

6. Reingewerts TH, Benyamini H, Lebendiker M, Shalev DE, Friedler A. (2009). The C-terminal domain of the HIV-1 Vif protein is natively unfolded in its unbound state. Protein Eng. Des. Sel. 22(5):281-7. [PubMed]

7. Katz C, Benyamini H, Rotem S, Lebendiker M, Danieli T, Iosub A, Refaely H, Dines M, Bronner V, Bravman T, Shalev DE, Rüdiger S, Friedler A. (2008) Molecular basis of the interaction between the antiapoptotic Bcl-2 family proteins and the proapoptotic protein ASPP2. Proc Natl Acad Sci U S A. 105(34):12277-82. [PubMed]

8. Rotem S, Katz C, Benyamini H, Lebendiker M, Veprintsev DB, Rüdiger S, Danieli T, Friedler A. (2008) The structure and interactions of the proline rich domain of ASPP2.[PubMed]

9. Benyamini, H., Shulman-Peleg, A., Wolfson, H.J., Belgorodsky, B., Fadeev, L., and Gozin, M. (2006) Interaction of C60-Fullerene and Carboxyfullerene with Proteins: Docking and Binding Site Alignment. Bioconjugate Chem 17, 378-386 [PubMed]

10. Inbar, Y., Benyamini, H., Nussinov, R., and Wolfson, H. J. (2005) Combinatorial docking approach for structure prediction of large proteins and multi-molecular assemblies. Phys Biol 2, S156-165 [PubMed]

11. Belgorodsky, B., Fadeev, L., Ittah, V., Benyamini, H., Zelner, S., Huppert, D., Kotlyar, A. B., and Gozin, M. (2005) Formation and characterization of stable human serum albumin-tris-malonic acid [C60]fullerene complex. Bioconjug Chem 16, 1058-1062 [PubMed]

12. Benyamini, H., Gunasekaran, K., Wolfson, H., and Nussinov, R. (2005) Fibril modelling by sequence and structure conservation analysis combined with protein docking techniques: Beta2-microglobulin amyloidosis. Biochim Biophys Acta 1753, 121-130 [PubMed]

13. Inbar, Y., Benyamini, H., Nussinov, R., and Wolfson, H. J. (2005) Prediction of multimolecular assemblies by multiple docking. J Mol Biol 349, 435-447 [PubMed]

14. Benyamini, H., Gunasekaran, K., Wolfson, H., and Nussinov, R. (2004) Amyloid proteins: Gelsolin. In Amyloid Proteins. The beta pleated sheet conformation and disease (Sipe, J., ed), Wiley-VCH [book page]

15. Dror, O., Benyamini, H., Nussinov, R., and Wolfson, H. J. (2003) Multiple structural alignment by secondary structures: algorithm and applications. Protein Sci 12, 2492-2507 [PubMed] [MASS webpage]

16. Inbar, Y., Benyamini, H., Nussinov, R., and Wolfson, H. J. (2003) Protein structure prediction via combinatorial assembly of sub-structural units. Bioinformatics 19 Suppl 1, i158-168 [PubMed]

17. Dror, O., Benyamini, H., Nussinov, R., and Wolfson, H. (2003) MASS: multiple structural alignment by secondary structures. Bioinformatics 19 Suppl 1, i95-104 [PubMed]

18. Benyamini, H., Gunasekaran, K., Wolfson, H., and Nussinov, R. (2003) Beta2-microglobulin amyloidosis: insights from conservation analysis and fibril modelling by protein docking techniques. J Mol Biol 330, 159-174 [PubMed]

19. Schneidman-Duhovny, D., Inbar, Y., Polak, V., Shatsky, M., Halperin, I., Benyamini, H., Barzilai, A., Dror, O., Haspel, N., Nussinov, R., and Wolfson, H. J. (2003) Taking geometry to its edge: fast unbound rigid (and hinge-bent) docking. Proteins 52, 107-112 [PubMed]

20. Benyamini, H., Gunasekaran, K., Wolfson, H., and Nussinov, R. (2003) Conservation and amyloid formation: a study of the gelsolin-like family. Proteins 51, 266-282 [PubMed]

From M.Sc. :
21. Avigad, S., Peleg, D., Barel, D., Benyaminy, H., Ben-Baruch, N., Taub, E., Shohat, M., Goshen, Y., Cohen, I. J., Yaniv, I., and Zaizov, R. (2004) Prenatal diagnosis in Li-Fraumeni syndrome. J Pediatr Hematol Oncol. 26, 541-545 [PubMed]

22. Blau, O., Avigad, S., Stark, B., Benyaminy, H., Luria, D., Kodman, Y., Cohen, I. J., Goshen, Y., Yaniv, I., and Zaizov, R. (2000) p53 mutation in intron 6 as a diagnostic marker for high risk childhood T-lineage acute lymphoblastic leukemia. Int. J. Pediat. Hem. Onc. 6, 361-367

23. Avigad, S., Benyaminy, H., Tamir, Y., Luria, D., Yaniv, I., Stein, J., Stark, B., and Zaizov, R. (1997) Prognostic relevance of genetic alterations in the p32 region of chromosome 1 in neuroblastoma. Eur. J. Cancer. 33, 1983-1985 [PubMed]

From my days as a research assistant at the Volcani center:
24. Ben-Yakir, D., Nestel, D., Ben-Herzel, H., Grossman, M., Benyaminy, H. & Chen, M.(1995). Postdiapause development and spring emergence of the european corn borer, ostrinianubilalis in israel. Phytoparasitica 23, 205-215

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